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Xin Li, Ph.D.

Xin Li, Ph.D.

Titles and Appointments

Assistant Professor

Schools
Medical School | Graduate School
Departments
Pediatrics | Immunology
Graduate Programs
Immunology, Molecular Microbiology
  • Biography

    Xin Li, Ph.D., is an Assistant Professor (tenure-track) in the Departments of Pediatrics and Immunology at UT Southwestern Medical Center.  His research focuses on host–microbiota interactions in both health and disease. Using innovative techniques in microbiology and immunology, and multiple model organisms (bacteria, fungi, mice, and humans), his research aims to investigate the fundamental mechanisms by which gut commensal bacteria and fungi regulate local and systemic inflammatory immune responses.

    For his Ph.D., Dr. Li studied the role of Tpl2, a host serine-threonine kinase, in modulating T regulatory and Th17 cell function, identifying a potential therapeutic target for autoimmune disorders. During his postdoctoral training at Weill Cornell Medical College, he focused on the impact of gut commensal fungi on host immune responses. His recent work revealed that fungal sensing by tissue-resident CX3CR1+ mononuclear cells in the gut can influence distal allergic airway disease, with specific immune cells transmitting signals to the lungs, initiating early mechanistic studies for gut-lung immune crosstalk (Li et al., Cell Host and Microbe, 2018; Leonardi, Li et al., Science, 2018). In a recent study (Li et al., Nature, 2022), Dr. Li demonstrated the significance of microbial strain diversity in driving inflammatory immunity. Dr. Li identified a key pore-forming toxin (candidalysin) that mediates niche-specific inflammatory immunity. In 2023, he joined the faculty at UT Southwestern in the Departments of Pediatrics and Immunology. Dr. Li and his team continue their work studying host and microbial interactions and tissue immunity using multiple model organisms.

    His new research directions involve:

    i) Identifying novel host factors involved in bacterial and fungal sensing to regulate inflammatory diseases.
    ii) Identifying new microbial factors involved in bacterial and fungal sensing to regulate inflammatory diseases. These factors may include toxins, RNAs, etc.
    iii) Utilizing fungi as a model system, genetic engineering of microbial effectors to understand how a microbe dictates protective immunity, and pathogenic immunity at tissue barriers.

    Contact: xin.li@utsouthwestern.edu 

  • Education
    Graduate School
    University of Georgia (2016), Immunology
  • Research Interest
    • Host-Microbe Interactions, Mucosal Immunology, RNA sensing, Fungal Immunology, and Inflammatory Diseases
  • Publications
    Microbiota metabolism of intestinal amino acids impacts host nutrient homeostasis and physiology
    Author Collaboration JL, Li TT, Chen X, Huo D, Arifuzzaman M, Qiao S, Jin WB, Shi H, Li XV, Iliev ID, Artis D, Guo CJ Cell Host and Microbe 2024 May 32 661-675.e10
    Author Correction: Immune regulation by fungal strain diversity in inflammatory bowel disease (Nature, (2022), 603, 7902, (672-678), 10.1038/s41586-022-04502-w)
    Li XV, Leonardi I, Putzel GG, Semon A, Fiers WD, Kusakabe T, Lin WY, Gao IH, Doron I, Gutierrez-Guerrero A, DeCelie MB, Carriche GM, Mesko M, Yang C, Naglik JR, Hube B, Scherl EJ, Iliev ID Nature 2022 Aug 608 E21
    Immune regulation by fungal strain diversity in inflammatory bowel disease
    Li XV, Leonardi I, Putzel GG, Semon A, Fiers WD, Kusakabe T, Lin WY, Gao IH, Doron I, Gutierrez-Guerrero A, DeCelie MB, Carriche GM, Mesko M, Yang C, Naglik JR, Hube B, Scherl EJ, Iliev ID Nature 2022 Mar 603 672-678
    Mucosal fungi promote gut barrier function and social behavior via Type 17 immunity
    Leonardi I, Gao IH, Lin WY, Allen M, Li XV, Fiers WD, De Celie MB, Putzel GG, Yantiss RK, Johncilla M, Colak D, Iliev ID Cell 2022 Mar 185 831-846.e14
    Genetic manipulation of gut microbes enables single-gene interrogation in a complex microbiome
    Jin WB, Li TT, Huo D, Qu S, Li XV, Arifuzzaman M, Lima SF, Shi HQ, Wang A, Putzel GG, Longman RS, Artis D, Guo CJ Cell 2022 Feb 185 547-562.e22
    Mycobiota-induced IgA antibodies regulate fungal commensalism in the gut and are dysregulated in Crohn’s disease
    Doron I, Mesko M, Li XV, Kusakabe T, Leonardi I, Shaw DG, Fiers WD, Lin WY, Bialt-DeCelie M, Román E, Longman RS, Pla J, Wilson PC, Iliev ID Nature microbiology 2021 Dec 6 1493-1504
    Human gut mycobiota tune immunity via CARD9-dependent induction of anti-fungal IgG antibodies
    Doron I, Leonardi I, Li XV, Fiers WD, Semon A, Bialt-DeCelie M, Migaud M, Gao IH, Lin WY, Kusakabe T, Puel A, Iliev ID Cell 2021 Feb 184 1017-1031.e14
    Macrophages Maintain Epithelium Integrity by Limiting Fungal Product Absorption
    Chikina AS, Nadalin F, Maurin M, San-Roman M, Thomas-Bonafos T, Li XV, Lameiras S, Baulande S, Henri S, Malissen B, Lacerda Mariano L, Barbazan J, Blander JM, Iliev ID, Matic Vignjevic D, Lennon-Duménil AM Cell 2020 Oct 183 411-428.e16
    Gut Mycobiota in Immunity and Inflammatory Disease
    Li XV, Leonardi I, Iliev ID Immunity 2019 Jun 50 1365-1379
    Response to Fungal Dysbiosis by Gut-Resident CX3CR1 + Mononuclear Phagocytes Aggravates Allergic Airway Disease
    Li X, Leonardi I, Semon A, Doron I, Gao IH, Putzel GG, Kim Y, Kabata H, Artis D, Fiers WD, Ramer-Tait AE, Iliev ID Cell Host and Microbe 2018 Dec 24 847-856.e4
  • Honors & Awards
    • Innovator Award, Kenneth Rainin Foundation
      (2025)
    • NIH/NIAD Director's New Innovator Award (DP2)
      (2025)
    • Early Career ACS-IRG award
      (2024)
    • NIH/NHLBI Pathway to Independence Award (K99/R00)
      (2023)
    • Charles H. Revson Senior Postdoctoral Biomedical Fellowship
      (2019-2022)
    • The American Association of Immunologists Careers in Immunology Fellowship
      (2015)
    • National Scholarship, Ministry of Education of China
      (2009)
  • Professional Associations/Affiliations
    • Member, the American Association of Immunologists (2014)