Kirill Medvedev, Ph.D.
Instructor
School Medical School
Department Biophysics
Research Interest
- Bioinformatics
- Cancer biology
- Computational Biology
- Machine Learning
Publications
Featured Publications
- Seminoma subtypes differ in the organization and functional state of the immune microenvironment.
- Savelyeva AV, Medvedev KE, 3 Biotech 2023 Mar 13 3 110
- Integrated Molecular Analysis Reveals 2 Distinct Subtypes of Pure Seminoma of the Testis.
- Medvedev KE, Savelyeva AV, Chen KS, Bagrodia A, Jia L, Grishin NV, Cancer Inform 2022 21 11769351221132634
- A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit.
- Medvedev KE, Kinch LN, Dustin Schaeffer R, Pei J, Grishin NV, J Mol Biol 2020 Dec 433 4 166788
- Functional analysis of Rossmann-like domains reveals convergent evolution of topology and reaction pathways.
- Medvedev KE, Kinch LN, Schaeffer RD, Grishin NV, PLoS Comput Biol 2019 12 15 12 e1007569
- DisEnrich: Database of Enriched Regions in Human Dark Proteome.
- Medvedev KE, Pei J, Grishin NV, Bioinformatics 2022 Jan
- Completeness and Consistency in Structural Domain Classifications.
- Schaeffer RD, Kinch LN, Pei J, Medvedev KE, Grishin NV, ACS Omega 2021 Jun 6 24 15698-15707
- Recent advances suggest increased influence of selective pressure in allostery.
- Bhat AS, Dustin Schaeffer R, Kinch L, Medvedev KE, Grishin NV, Curr Opin Struct Biol 2020 06 62 183-188
- ECOD: identification of distant homology among multidomain and transmembrane domain proteins.
- Schaeffer RD, Kinch L, Medvedev KE, Pei J, Cheng H, Grishin N, BMC Mol Cell Biol 2019 06 20 1 18
- Functional and evolutionary analysis of viral proteins containing a Rossmann-like fold.
- Medvedev KE, Kinch LN, Grishin NV, Protein Sci 2018 08 27 8 1450-1463
- High temperature and pressure influence the interdomain orientation of Nip7 proteins from P. abyssi and P. furiosus: MD simulations.
- Medvedev KE, Kolchanov NA, Afonnikov DA, J Biomol Struct Dyn 2018 01 36 1 68-82