Graduate School
Uni of Michigan - Ann Arbor (2014), Biostatistics

Research Interest

  • Antibiotic resistance
  • Deep learning
  • Microbiome
  • Statistical computation
  • Statistical genetics


Featured Publications LegendFeatured Publications

Enhanced Pathology Image Quality with Restore-Generative Adversarial Network.
Rong R, Wang S, Zhang X, Wen Z, Cheng X, Jia L, Yang DM, Xie Y, Zhan X, Xiao G, Am J Pathol 2023 Jan
IsoAnalytics: A Single-cell Proteomics Web Server.
Palmer SN, Koh AY, Zhan X, bioRxiv 2023 Jan
MB-SupCon: Microbiome-based Predictive Models via Supervised Contrastive Learning.
Yang S, Wang S, Wang Y, Rong R, Kim J, Li B, Koh AY, Xiao G, Li Q, Liu DJ, Zhan X, J Mol Biol 2022 Aug 434 15 167693
MetaPrism: A versatile toolkit for joint taxa/gene analysis of metagenomic sequencing data.
Kim J, Jiang S, Wang Y, Xiao G, Xie Y, Liu DJ, Li Q, Koh A, Zhan X, G3 (Bethesda) 2021 Apr 11 4
MB-GAN: Microbiome Simulation via Generative Adversarial Network.
Rong R, Jiang S, Xu L, Xiao G, Xie Y, Liu DJ, Li Q, Zhan X, Gigascience 2021 Feb 10 2
BayesSMILES: Bayesian Segmentation Modeling for Longitudinal Epidemiological Studies.
Jiang S, Zhou Q, Zhan X, Li Q, medRxiv 2021 Jan
VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning.
Kim J, Greenberg DE, Pifer R, Jiang S, Xiao G, Shelburne SA, Koh A, Xie Y, Zhan X, PLoS Comput Biol 2020 01 16 1 e1007511
A Bayesian zero-inflated negative binomial regression model for the integrative analysis of microbiome data.
Jiang S, Xiao G, Koh AY, Kim J, Li Q, Zhan X, Biostatistics 2019 Dec
Pathology Image Analysis Using Segmentation Deep Learning Algorithms.
Wang S, Yang DM, Rong R, Zhan X, Xiao G, Am. J. Pathol. 2019 Jun
FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.
Kim J, Kim MS, Koh AY, Xie Y, Zhan X BMC Bioinformatics 2016 Oct 17 1 420

Professional Associations/Affiliations

  • Center for the Genetics of Host Defense (2014)
  • Quantitative Biomedical Research Center (2014)