Xiaowei Zhan, Ph.D.

• Antibiotic resistance
• Deep learning
• Microbiome
• Statistical computation
• Statistical genetics

 Featured Publications

Enhanced Pathology Image Quality with Restore-Generative Adversarial Network.

Rong R, Wang S, Zhang X, Wen Z, Cheng X, Jia L, Yang DM, Xie Y, Zhan X, Xiao G, Am J Pathol 2023 Jan

IsoAnalytics: A Single-cell Proteomics Web Server.

Palmer SN, Koh AY, Zhan X, bioRxiv 2023 Jan

MB-SupCon: Microbiome-based Predictive Models via Supervised Contrastive Learning.

Yang S, Wang S, Wang Y, Rong R, Kim J, Li B, Koh AY, Xiao G, Li Q, Liu DJ, Zhan X, J Mol Biol 2022 Aug 434 15 167693

MetaPrism: A versatile toolkit for joint taxa/gene analysis of metagenomic sequencing data.

Kim J, Jiang S, Wang Y, Xiao G, Xie Y, Liu DJ, Li Q, Koh A, Zhan X, G3 (Bethesda) 2021 Apr 11 4

MB-GAN: Microbiome Simulation via Generative Adversarial Network.

Rong R, Jiang S, Xu L, Xiao G, Xie Y, Liu DJ, Li Q, Zhan X, Gigascience 2021 Feb 10 2

BayesSMILES: Bayesian Segmentation Modeling for Longitudinal Epidemiological Studies.

Jiang S, Zhou Q, Zhan X, Li Q, medRxiv 2021 Jan

VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning.

Kim J, Greenberg DE, Pifer R, Jiang S, Xiao G, Shelburne SA, Koh A, Xie Y, Zhan X, PLoS Comput Biol 2020 01 16 1 e1007511

A Bayesian zero-inflated negative binomial regression model for the integrative analysis of microbiome data.

Jiang S, Xiao G, Koh AY, Kim J, Li Q, Zhan X, Biostatistics 2019 Dec

Pathology Image Analysis Using Segmentation Deep Learning Algorithms.

Wang S, Yang DM, Rong R, Zhan X, Xiao G, Am. J. Pathol. 2019 Jun

FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies.

Kim J, Kim MS, Koh AY, Xie Y, Zhan X BMC Bioinformatics 2016 Oct 17 1 420

• Center for the Genetics of Host Defense (2014)
• Quantitative Biomedical Research Center (2014)